Sparse attention

Reference implementation and checkpoint configuration deepseek-ai/DeepSeek-V4.1-Flash @ 2cba9e4 · parameter count checked against the checkpoint’s tensor headers · text model only · How to read

40 layers › 2 groups of 6 layers › 5 reusing layers › Compressed sparse attention › Sparse attention

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no parameterstorch.cat([topk_idxs, compress_idxs], dim=-1) · 778

Put the selected compressed positions after the window positions, as rows of the joined keys and values.

J=[ Jw;  I+∣W∣ ]{\htmlData{light=allowed join-lists}{J}}=[\,{\htmlData{light=window-allowed window-rows}{J^{w}}};\;{\htmlData{light=selected}{I}}+\lvert W\rvert\,]
in
JwJ^{w} [B batch, 1 positions, 128 window]II [B batch, 1 positions, 500 selected]
out
JJ [B batch, 1 positions, 628 listed rows]

n is at most 128 + 512.

Codemodel.py 488–580, 765–789
model.py 765–789
    def forward(self, x: torch.Tensor, start_pos: int):
        bsz, seqlen, _ = x.size()
        freqs_cis = self.freqs_cis[start_pos : start_pos + seqlen]
        rd = self.rope_head_dim

        qr = self.q_norm(self.wq_a(x))
        q = self.wq_b(qr).unflatten(-1, (self.n_local_heads, self.head_dim))
        apply_rotary_emb(q[..., -rd:], freqs_cis)

        kv, topk_idxs = self._window_kv(x, freqs_cis, start_pos)
        if self.compress_ratio:
            compress_kv, compress_idxs = self._compress_kv(x, qr, start_pos, kv.size(1))
            kv = torch.cat([kv, compress_kv], dim=1)
            topk_idxs = torch.cat([topk_idxs, compress_idxs], dim=-1)

        o = sparse_attn(q, kv, self.attn_sink, topk_idxs, self.softmax_scale)
        apply_rotary_emb(o[..., -rd:], freqs_cis, True)

        # wo_a is block-diagonal over groups (each projects only its own heads), hence einsum not
        # Linear. convert.py dequantizes it to bf16; an fp8 grouped GEMM would halve the memory.
        o = o.view(bsz, seqlen, self.n_local_groups, -1)
        wo_a = self.wo_a.weight.view(self.n_local_groups, self.o_lora_rank, -1)
        o = torch.einsum("bsgd,grd->bsgr", o, wo_a)
        x = self.wo_b(o.flatten(2))
        return x
model.py 488–580
class Indexer(torch.nn.Module):
    """Keeps the `index_topk` best compressed positions per query.

    A small side attention: fp4 query heads against one shared key per compressed position, scores
    rectified then combined by `weights_proj`. With a candidate source this is the second of two
    levels; `select_candidate_blocks` is the first.
    """

    def __init__(self, args: ModelArgs, layer_id: int):
        super().__init__()
        # the index keys are derived from the compressor's latent, so only a layer that compresses
        # its own KV can produce them; every other indexer reads them from that layer's cache
        self.owns_k = layer_id in args.kv_source_layers
        self.compress_ratio = args.compress_ratios[layer_id]
        self.is_candidate_source = layer_id == args.candidate_source_layer
        self.uses_candidates = 0 <= args.candidate_source_layer < layer_id
        self.candidate_topk_blocks = args.candidate_topk_blocks
        self.candidate_block_size = args.candidate_block_size
        self.dim = args.dim
        self.n_heads = args.index_n_heads
        self.n_local_heads = args.index_n_heads // world_size
        self.index_head_dim = args.index_head_dim
        self.rope_head_dim = args.rope_head_dim
        self.index_topk = args.index_topk
        self.q_lora_rank = args.q_lora_rank
        self.softmax_scale = self.index_head_dim**-0.5
        self.wq_b = ColumnParallelLinear(self.q_lora_rank, self.n_heads * self.index_head_dim)
        self.weights_proj = ColumnParallelLinear(self.dim, self.n_heads, dtype=torch.bfloat16)
        self.freqs_cis: torch.Tensor | None = None
        if self.owns_k:
            self.wk = Linear(args.head_dim, self.index_head_dim, dtype=torch.bfloat16)
            self.k_norm = RMSNorm(self.index_head_dim, args.norm_eps)
            self.k_cache: torch.Tensor
            self.register_buffer(
                "k_cache",
                torch.zeros(args.max_batch_size, args.max_seq_len // self.compress_ratio, args.index_head_dim),
                persistent=False,
            )

    def forward(self, x: torch.Tensor, qr: torch.Tensor, latent: torch.Tensor, start_pos: int, offset: int):
        """`latent` is this layer's RoPE-free compressed latent, None when this layer does not
        compress or when its current group is still incomplete. An index-key owner turns it into
        index keys here, which has to happen before Attention overwrites that same storage with
        the RoPE'd, quantized values."""
        assert self.freqs_cis is not None
        bsz, seqlen, _ = x.size()
        ratio, rd, end_pos = self.compress_ratio, self.rope_head_dim, start_pos + seqlen

        # latent is None while a group is still filling up, so there is nothing to publish yet
        if self.owns_k and latent is not None:
            # a latent stands for the first token of its group, so group j takes position j * ratio
            freqs = (
                self.freqs_cis[: seqlen - seqlen % ratio : ratio]
                if start_pos == 0
                else self.freqs_cis[start_pos + 1 - ratio].unsqueeze(0)
            )
            k = self.k_norm(self.wk(latent))
            apply_rotary_emb(k[..., -rd:], freqs)
            fp4_act_quant(k, fp4_block_size, True)
            self.k_cache[:bsz, start_pos // ratio : start_pos // ratio + k.size(1)] = k
            shared_attn.index_k = self.k_cache

        q = self.wq_b(qr).unflatten(-1, (self.n_local_heads, self.index_head_dim))
        apply_rotary_emb(q[..., -rd:], self.freqs_cis[start_pos:end_pos])
        fp4_act_quant(q, fp4_block_size, True)

        index_k = shared_attn.index_k[:bsz, : end_pos // ratio]
        weights = self.weights_proj(x) * (self.softmax_scale * self.n_heads**-0.5)
        index_score = torch.einsum("bshd,btd->bsht", q, index_k)
        index_score = (index_score.relu_() * weights.unsqueeze(-1)).sum(dim=2)
        if world_size > 1:
            dist.all_reduce(index_score)

        # how many compressed positions each query can see: a block becomes visible once the query
        # has passed its last token. One query per decode step, so there it is just a number.
        if start_pos == 0:
            compress_lens = (torch.arange(1, seqlen + 1, device=x.device) // ratio).unsqueeze(-1)
            index_score.masked_fill_(torch.arange(seqlen // ratio, device=x.device) >= compress_lens, -torch.inf)
        else:
            compress_lens = end_pos // ratio

        if self.is_candidate_source:
            shared_attn.candidates = select_candidate_blocks(
                index_score, compress_lens, self.candidate_topk_blocks, self.candidate_block_size
            )
        elif self.uses_candidates:
            # level two: score with our own weights, but only inside the source's candidate blocks
            index_score = index_score.masked_fill(~shared_attn.candidates, -torch.inf)

        # top-k by score, re-sorted into position order; unreachable -> -1, rest shifted by offset
        topk = min(self.index_topk, end_pos // ratio)
        idxs = index_score.topk(topk, dim=-1, sorted=False).indices.sort(dim=-1).values
        return torch.where(idxs < compress_lens, idxs + offset, -1).int()
Sources2

Direct evidence

Queries through the latent with their rotary part rotated; window and compressed keys and values joined; sparse attention over the listed positions; the output rotated back, projected per group of heads and then to the model width.

attention-forward · deepseek-ai/DeepSeek-V4.1-Flash / inference/model.py
Pinned revision 2cba9e42aa02 ↗ · lines 765–789

Read code excerpt
    def forward(self, x: torch.Tensor, start_pos: int):
        bsz, seqlen, _ = x.size()
        freqs_cis = self.freqs_cis[start_pos : start_pos + seqlen]
        rd = self.rope_head_dim

        qr = self.q_norm(self.wq_a(x))
        q = self.wq_b(qr).unflatten(-1, (self.n_local_heads, self.head_dim))
        apply_rotary_emb(q[..., -rd:], freqs_cis)

        kv, topk_idxs = self._window_kv(x, freqs_cis, start_pos)
        if self.compress_ratio:
            compress_kv, compress_idxs = self._compress_kv(x, qr, start_pos, kv.size(1))
            kv = torch.cat([kv, compress_kv], dim=1)
            topk_idxs = torch.cat([topk_idxs, compress_idxs], dim=-1)

        o = sparse_attn(q, kv, self.attn_sink, topk_idxs, self.softmax_scale)
        apply_rotary_emb(o[..., -rd:], freqs_cis, True)

        # wo_a is block-diagonal over groups (each projects only its own heads), hence einsum not
        # Linear. convert.py dequantizes it to bf16; an fp8 grouped GEMM would halve the memory.
        o = o.view(bsz, seqlen, self.n_local_groups, -1)
        wo_a = self.wo_a.weight.view(self.n_local_groups, self.o_lora_rank, -1)
        o = torch.einsum("bsgd,grd->bsgr", o, wo_a)
        x = self.wo_b(o.flatten(2))
        return x

Direct evidence

The indexer scores every compressed position for every query with few small heads against one shared key, masks what the query may not see, and keeps the best 512; the candidate source also publishes its candidate blocks, and later indexers score inside them.

indexer · deepseek-ai/DeepSeek-V4.1-Flash / inference/model.py
Pinned revision 2cba9e42aa02 ↗ · lines 488–580

Read code excerpt
class Indexer(torch.nn.Module):
    """Keeps the `index_topk` best compressed positions per query.

    A small side attention: fp4 query heads against one shared key per compressed position, scores
    rectified then combined by `weights_proj`. With a candidate source this is the second of two
    levels; `select_candidate_blocks` is the first.
    """

    def __init__(self, args: ModelArgs, layer_id: int):
        super().__init__()
        # the index keys are derived from the compressor's latent, so only a layer that compresses
        # its own KV can produce them; every other indexer reads them from that layer's cache
        self.owns_k = layer_id in args.kv_source_layers
        self.compress_ratio = args.compress_ratios[layer_id]
        self.is_candidate_source = layer_id == args.candidate_source_layer
        self.uses_candidates = 0 <= args.candidate_source_layer < layer_id
        self.candidate_topk_blocks = args.candidate_topk_blocks
        self.candidate_block_size = args.candidate_block_size
        self.dim = args.dim
        self.n_heads = args.index_n_heads
        self.n_local_heads = args.index_n_heads // world_size
        self.index_head_dim = args.index_head_dim
        self.rope_head_dim = args.rope_head_dim
        self.index_topk = args.index_topk
        self.q_lora_rank = args.q_lora_rank
        self.softmax_scale = self.index_head_dim**-0.5
        self.wq_b = ColumnParallelLinear(self.q_lora_rank, self.n_heads * self.index_head_dim)
        self.weights_proj = ColumnParallelLinear(self.dim, self.n_heads, dtype=torch.bfloat16)
        self.freqs_cis: torch.Tensor | None = None
        if self.owns_k:
            self.wk = Linear(args.head_dim, self.index_head_dim, dtype=torch.bfloat16)
            self.k_norm = RMSNorm(self.index_head_dim, args.norm_eps)
            self.k_cache: torch.Tensor
            self.register_buffer(
                "k_cache",
                torch.zeros(args.max_batch_size, args.max_seq_len // self.compress_ratio, args.index_head_dim),
                persistent=False,
            )

    def forward(self, x: torch.Tensor, qr: torch.Tensor, latent: torch.Tensor, start_pos: int, offset: int):
        """`latent` is this layer's RoPE-free compressed latent, None when this layer does not
        compress or when its current group is still incomplete. An index-key owner turns it into
        index keys here, which has to happen before Attention overwrites that same storage with
        the RoPE'd, quantized values."""
        assert self.freqs_cis is not None
        bsz, seqlen, _ = x.size()
        ratio, rd, end_pos = self.compress_ratio, self.rope_head_dim, start_pos + seqlen

        # latent is None while a group is still filling up, so there is nothing to publish yet
        if self.owns_k and latent is not None:
            # a latent stands for the first token of its group, so group j takes position j * ratio
            freqs = (
                self.freqs_cis[: seqlen - seqlen % ratio : ratio]
                if start_pos == 0
                else self.freqs_cis[start_pos + 1 - ratio].unsqueeze(0)
            )
            k = self.k_norm(self.wk(latent))
            apply_rotary_emb(k[..., -rd:], freqs)
            fp4_act_quant(k, fp4_block_size, True)
            self.k_cache[:bsz, start_pos // ratio : start_pos // ratio + k.size(1)] = k
            shared_attn.index_k = self.k_cache

        q = self.wq_b(qr).unflatten(-1, (self.n_local_heads, self.index_head_dim))
        apply_rotary_emb(q[..., -rd:], self.freqs_cis[start_pos:end_pos])
        fp4_act_quant(q, fp4_block_size, True)

        index_k = shared_attn.index_k[:bsz, : end_pos // ratio]
        weights = self.weights_proj(x) * (self.softmax_scale * self.n_heads**-0.5)
        index_score = torch.einsum("bshd,btd->bsht", q, index_k)
        index_score = (index_score.relu_() * weights.unsqueeze(-1)).sum(dim=2)
        if world_size > 1:
            dist.all_reduce(index_score)

        # how many compressed positions each query can see: a block becomes visible once the query
        # has passed its last token. One query per decode step, so there it is just a number.
        if start_pos == 0:
            compress_lens = (torch.arange(1, seqlen + 1, device=x.device) // ratio).unsqueeze(-1)
            index_score.masked_fill_(torch.arange(seqlen // ratio, device=x.device) >= compress_lens, -torch.inf)
        else:
            compress_lens = end_pos // ratio

        if self.is_candidate_source:
            shared_attn.candidates = select_candidate_blocks(
                index_score, compress_lens, self.candidate_topk_blocks, self.candidate_block_size
            )
        elif self.uses_candidates:
            # level two: score with our own weights, but only inside the source's candidate blocks
            index_score = index_score.masked_fill(~shared_attn.candidates, -torch.inf)

        # top-k by score, re-sorted into position order; unreachable -> -1, rest shifted by offset
        topk = min(self.index_topk, end_pos // ratio)
        idxs = index_score.topk(topk, dim=-1, sorted=False).indices.sort(dim=-1).values
        return torch.where(idxs < compress_lens, idxs + offset, -1).int()